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Intron Name: Anas_platyrhynchos_platyrhynchos_2_866893_869145_R

Intron Information:

Intron Rank:

139233

Intron Class:

major

Intron Phase:

Intron Coordinates:

866893 - 869145

Intron Length:

2253

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTCAA

U12 Branch Point Sequence:

TTTTTTTTGTCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

84.6

33.3

Major BPS

60.5

0.26

1.3

63.4

44.3

Major PPT

89.2

0.88

0.7

81.2

36.5

Minor 5ss

-1.4

3.4

57.1

47.2

Minor BPS

48.7

-0

3.5

85.97

34.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022365

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024216

866843 - 876022

9180