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Intron Name: Anas_platyrhynchos_platyrhynchos_2_869229_875885_R


Intron Information:

Intron Rank:
139234

Intron Class:
major

Intron Phase:

Intron Coordinates:
869229 - 875885

Intron Length:
6657

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTG|GTAAACACT

5'SS Class:
major

3'SS Sequence:
ACGTGTTTTATAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATATTAC

U12 Branch Point Sequence:
AATTCCAGAAGG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74
0.57
1
70.4
39.6

Major BPS
66
0.4
1.1
57.8
38.6

Major PPT
71.5
0.48
0.9
65
40.8

Minor 5ss
41.5
-0.9
3
55.5
43

Minor BPS
47.4
-0.3
2.1
57.38
43.4

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

866843 - 876022
9180