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Intron Name: Anas_platyrhynchos_platyrhynchos_2_8707466_8709146_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
8707466 - 8709146

Intron Length:
1681

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACATTAT

5'SS Class:
major

3'SS Sequence:
CTTTGTAAAATAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTGTAAA

U12 Branch Point Sequence:
TCCTTTGTAAAA

Flanking Amino Acid:
CREEFALQPQVLLSCSHVFH

Intron Amino Acid Position:
145

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.9
0.68
1
77.5
33.4

Major BPS
75.2
0.63
1.1
75.9
36.3

Major PPT
63.6
0.31
1
59.9
39.6

Minor 5ss
40.1
-1.1
3.2
57.9
46.7

Minor BPS
47.5
-0.1
2.1
58.98
41.6

Associated Gene:

Gene:
RNF32

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

8701354 - 8716549
15196