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Intron Name: Anas_platyrhynchos_platyrhynchos_2_87143768_87144642_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

87143768 - 87144642

Intron Length:

875

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGGTC

5'SS Class:

major

3'SS Sequence:

CCTTTCCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAGCTAC

U12 Branch Point Sequence:

GCTCCTTTCCCT

Flanking Amino Acid:

EVGAEVTGTQVELLPERDLE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.1

64.9

41.2

Major BPS

39.4

-0.6

1.3

27.9

34.4

Major PPT

83.1

0.74

0.7

77.2

24.8

Minor 5ss

32.8

-2

3.8

49.9

46.7

Minor BPS

39.6

-0.7

3.5

65.47

45.3

Associated Gene:

Gene:

VSTM2A

Ensembl Gene ID:

ENSAPLG00000015377

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043051

87141020 - 87178518

37499

ENSAPLT00000025233

87141020 - 87167088

26069

ENSAPLT00000016033

87141020 - 87153355

12336