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Intron Name: Anas_platyrhynchos_platyrhynchos_2_87144694_87147918_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

87144694 - 87147918

Intron Length:

3225

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGC|GTAAGTGGC

5'SS Class:

major

3'SS Sequence:

GGAAAATTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGAAAA

U12 Branch Point Sequence:

TTTTCCTGGAAA

Flanking Amino Acid:

DLENDGTKISTVKVQGNDIS

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.9

0.42

1.4

Major BPS

47.2

-0.1

1.3

41.5

Major PPT

60.9

0.25

1.1

51.2

46.6

Minor 5ss

-1.8

3.2

39.8

Minor BPS

68.1

0.56

1.6

80.79

34.1

Associated Gene:

Gene:

VSTM2A

Ensembl Gene ID:

ENSAPLG00000015377

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016033

87141020 - 87153355

12336

ENSAPLT00000043051

87141020 - 87178518

37499

ENSAPLT00000025233

87141020 - 87167088

26069