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Intron Name: Anas_platyrhynchos_platyrhynchos_2_87148256_87178396_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

87148256 - 87178396

Intron Length:

30141

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGTAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTATTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TATTTATTAATG

Flanking Amino Acid:

AKIPKQSPQSVRYVSFGNKM

Intron Amino Acid Position:

212

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

73.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

93.3

0.97

0.7

89.4

25.4

Minor 5ss

42.1

-0.9

3.1

54.8

49.4

Minor BPS

64.9

0.33

1.6

69.42

37.9

Associated Gene:

Gene:

VSTM2A

Ensembl Gene ID:

ENSAPLG00000015377

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043051

87141020 - 87178518

37499