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Intron Name: Anas_platyrhynchos_platyrhynchos_2_8728554_8732507_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8728554 - 8732507

Intron Length:

3954

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TCAATTTTATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCAAATTCAATT

Flanking Amino Acid:

SALPVMSRTLGITRFDLLGD

Intron Amino Acid Position:

408

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.9

77.6

32.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

74.7

0.56

Minor 5ss

31.6

-2.1

3.1

31.7

42.6

Minor BPS

47.7

-0

1.7

62.72

41.6

Associated Gene:

Gene:

LMBR1

Ensembl Gene ID:

ENSAPLG00000006761

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007078

8726215 - 8790415

64201