Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_87485517_87495589_R

Intron Information:

Intron Rank:

151378

Intron Class:

major

Intron Phase:

Intron Coordinates:

87485517 - 87495589

Intron Length:

10073

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATATGG

5'SS Class:

major

3'SS Sequence:

GTGTTTTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

ATTATCATGATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

65.3

41.4

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

77.9

0.63

0.9

72.5

37.8

Minor 5ss

37.4

-1.4

48.1

47.4

Minor BPS

54.4

0.22

1.6

74.59

35.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028997

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021720

87470182 - 87495632

25451