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Intron Name: Anas_platyrhynchos_platyrhynchos_2_87968891_88000411_R

Intron Information:

Intron Rank:

132592

Intron Class:

major

Intron Phase:

Intron Coordinates:

87968891 - 88000411

Intron Length:

31521

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAAAAAA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTTAA

U12 Branch Point Sequence:

CTTTACTTAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

0.9

75.4

28.5

Major BPS

74.4

0.61

0.9

63.9

34.9

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

26.7

-2.7

2.8

30.6

42.8

Minor BPS

69.1

0.6

1.6

77.86

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018577

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019664

87968183 - 88006592

38410