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Intron Name: Anas_platyrhynchos_platyrhynchos_2_88026300_88031772_F

Intron Information:

Intron Rank:

139703

Intron Class:

major

Intron Phase:

Intron Coordinates:

88026300 - 88031772

Intron Length:

5473

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGACAA

5'SS Class:

strong_major

3'SS Sequence:

TTTATTTTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

CTTTTCTTAATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

69.6

36.5

Major BPS

0.92

0.9

86.2

29.1

Major PPT

87.6

0.84

0.7

81.3

36.3

Minor 5ss

37.4

-1.4

47.2

48.2

Minor BPS

76.3

0.69

1.3

74.4

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025114

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046328

88026243 - 88037515

11273