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Intron Name: Anas_platyrhynchos_platyrhynchos_2_88031857_88037163_F

Intron Information:

Intron Rank:

139704

Intron Class:

major

Intron Phase:

Intron Coordinates:

88031857 - 88037163

Intron Length:

5307

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TCCCCCCTATCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TTGTTGTTATTC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.8

89.9

22.1

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

71.8

0.49

0.8

69.9

29.3

Minor 5ss

-1

2.8

51.7

39.1

Minor BPS

48.6

-0.1

2.2

65.04

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025114

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046328

88026243 - 88037515

11273