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Intron Name: Anas_platyrhynchos_platyrhynchos_2_8815687_8816529_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8815687 - 8816529

Intron Length:

843

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGGTGT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTGGTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

GTAGTCTCATTT

Flanking Amino Acid:

EPPDPQEEEEDHNHSATKYV

Intron Amino Acid Position:

285

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

70.4

42.5

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

63.2

0.3

1.2

38.8

Minor 5ss

37.1

-1.5

3.6

55.4

48.8

Minor BPS

45.9

-0.2

1.8

61.22

42.9

Associated Gene:

Gene:

NOM1

Ensembl Gene ID:

ENSAPLG00000006585

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006858

8814835 - 8830339

15505