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Intron Name: Anas_platyrhynchos_platyrhynchos_2_8819855_8821073_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8819855 - 8821073

Intron Length:

1219

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGAATT

5'SS Class:

strong_major

3'SS Sequence:

GCTGTTATTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

TGCTACTTATTA

Flanking Amino Acid:

EKLRKLQRTLVHSSSSGKET

Intron Amino Acid Position:

537

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

82.4

29.7

Major BPS

84.7

0.86

74.3

40.7

Major PPT

64.1

0.32

1.1

60.7

43.9

Minor 5ss

34.1

-1.8

3.2

46.4

Minor BPS

54.3

0.13

1.8

64.93

41.7

Associated Gene:

Gene:

NOM1

Ensembl Gene ID:

ENSAPLG00000006585

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006858

8814835 - 8830339

15505