Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

88245913 - 88280685

Intron Length:

34773

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGAGAA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTACAATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

TTTTCTTTACAA

Flanking Amino Acid:

DQNYQNYILRALGQIMLYVD

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

31.2

Major BPS

73.8

0.59

0.9

26.8

Major PPT

73.8

0.54

0.9

71.1

33.2

Minor 5ss

35.8

-1.6

3.3

46.4

48.9

Minor BPS

67.9

0.56

1.7

80.33

35.6

Associated Gene:

Gene:

FHOD3

Ensembl Gene ID:

ENSAPLG00000006413

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018287

88053543 - 88431643

378101

ENSAPLT00000033509

88053543 - 88431643

378101

ENSAPLT00000047318

88053543 - 88431643

378101

ENSAPLT00000006656

88053543 - 88431643

378101

ENSAPLT00000032874

88053543 - 88431643

378101

ENSAPLT00000040092

88053543 - 88418019

364477

ENSAPLT00000026769

88053543 - 88431643

378101

ENSAPLT00000037591

88053543 - 88431643

378101

ENSAPLT00000018785

88061361 - 88431643

370283

ENSAPLT00000036378

88053543 - 88431643

378101

Intron Name: Anas_platyrhynchos_platyrhynchos_2_88245913_88280685_F

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: