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Intron Name: Anas_platyrhynchos_platyrhynchos_2_8825539_8825885_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8825539 - 8825885

Intron Length:

347

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGAAA

5'SS Class:

strong_major

3'SS Sequence:

CCTTGACGCCTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACTTAAA

U12 Branch Point Sequence:

TTTCCCTTGACG

Flanking Amino Acid:

KFCEYERRFQVTFQFSIWDK

Intron Amino Acid Position:

678

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

77.3

32.6

Major BPS

0.47

69.9

32.6

Major PPT

59.3

0.21

50.6

38.3

Minor 5ss

30.9

-2.2

3.2

46.4

Minor BPS

79.5

0.78

1.2

80.72

34.6

Associated Gene:

Gene:

NOM1

Ensembl Gene ID:

ENSAPLG00000006585

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006858

8814835 - 8830339

15505