Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_8826018_8826843_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8826018 - 8826843

Intron Length:

826

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGGTGTG

5'SS Class:

major

3'SS Sequence:

GTTCTAAAACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

TGTTCTAAAACC

Flanking Amino Acid:

TKSLPLSVLKVIEFSELDKP

Intron Amino Acid Position:

722

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

1.2

68.2

42.9

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

61.5

0.26

1.1

53.7

44.1

Minor 5ss

31.3

-2.1

3.3

40.4

45.9

Minor BPS

55.6

0.15

1.9

71.93

39.2

Associated Gene:

Gene:

NOM1

Ensembl Gene ID:

ENSAPLG00000006585

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006858

8814835 - 8830339

15505