Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

88317761 - 88323205

Intron Length:

5445

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTTTG

5'SS Class:

major

3'SS Sequence:

CTTTGATTCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTTCCTTTGATT

Flanking Amino Acid:

LVYAMTLVNKTLSGLPDQDS

Intron Amino Acid Position:

272

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

72.6

39.2

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

75.7

0.58

0.8

73.7

35.9

Minor 5ss

46.3

-0.4

2.4

58.6

Minor BPS

0.9

1.1

88.36

29.9

Associated Gene:

Gene:

FHOD3

Ensembl Gene ID:

ENSAPLG00000006413

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006656

88053543 - 88431643

378101

ENSAPLT00000032874

88053543 - 88431643

378101

ENSAPLT00000040092

88053543 - 88418019

364477

ENSAPLT00000026769

88053543 - 88431643

378101

ENSAPLT00000037591

88053543 - 88431643

378101

ENSAPLT00000018785

88061361 - 88431643

370283

ENSAPLT00000036378

88053543 - 88431643

378101

ENSAPLT00000018287

88053543 - 88431643

378101

ENSAPLT00000033509

88053543 - 88431643

378101

ENSAPLT00000047318

88053543 - 88431643

378101

Intron Name: Anas_platyrhynchos_platyrhynchos_2_88317761_88323205_F

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: