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Intron Name: Anas_platyrhynchos_platyrhynchos_2_88327140_88328392_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

88327140 - 88328392

Intron Length:

1253

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

GCTGGCTGTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTCAT

U12 Branch Point Sequence:

TTTTCCATCACG

Flanking Amino Acid:

HGQRVEGLSESELEAKSHMV

Intron Amino Acid Position:

399

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

77.2

32.8

Major BPS

79.8

0.74

0.9

81.3

29.9

Major PPT

65.9

0.36

1.1

61.3

44.6

Minor 5ss

32.6

-2

3.4

44.1

43.8

Minor BPS

62.4

0.24

2.1

76.44

Associated Gene:

Gene:

FHOD3

Ensembl Gene ID:

ENSAPLG00000006413

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037591

88053543 - 88431643

378101

ENSAPLT00000036378

88053543 - 88431643

378101

ENSAPLT00000026769

88053543 - 88431643

378101

ENSAPLT00000040092

88053543 - 88418019

364477