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Intron Name: Anas_platyrhynchos_platyrhynchos_2_88327140_88341008_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

88327140 - 88341008

Intron Length:

13869

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

GGTGTGACCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TTGGTGTGACCT

Flanking Amino Acid:

HGQRVEGLSEREEEECEEED

Intron Amino Acid Position:

399

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

77.2

32.8

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

60.9

0.24

55.3

44.6

Minor 5ss

32.6

-2

3.4

44.1

43.8

Minor BPS

42.2

-0.5

2.3

63.52

46.9

Associated Gene:

Gene:

FHOD3

Ensembl Gene ID:

ENSAPLG00000006413

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018287

88053543 - 88431643

378101

ENSAPLT00000047318

88053543 - 88431643

378101

ENSAPLT00000032874

88053543 - 88431643

378101