Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

88377882 - 88382912

Intron Length:

5031

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGCTC

5'SS Class:

major

3'SS Sequence:

CTTCTTTATCAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TCTTCTTTATCA

Flanking Amino Acid:

SKSKELPVTKKTAADGKRQE

Intron Amino Acid Position:

976

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.1

61.3

43.5

Major BPS

83.9

0.84

73.9

41.3

Major PPT

72.2

0.5

1.1

71.6

37.6

Minor 5ss

33.6

-1.9

3.7

50.1

46.4

Minor BPS

71.4

0.67

1.5

78.76

38.3

Associated Gene:

Gene:

FHOD3

Ensembl Gene ID:

ENSAPLG00000006413

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018287

88053543 - 88431643

378101

ENSAPLT00000033509

88053543 - 88431643

378101

ENSAPLT00000047318

88053543 - 88431643

378101

ENSAPLT00000006656

88053543 - 88431643

378101

ENSAPLT00000032874

88053543 - 88431643

378101

ENSAPLT00000040092

88053543 - 88418019

364477

ENSAPLT00000026769

88053543 - 88431643

378101

ENSAPLT00000037591

88053543 - 88431643

378101

ENSAPLT00000018785

88061361 - 88431643

370283

ENSAPLT00000036378

88053543 - 88431643

378101

Intron Name: Anas_platyrhynchos_platyrhynchos_2_88377882_88382912_F

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: