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Intron Name: Anas_platyrhynchos_platyrhynchos_2_88521618_88545622_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

88521618 - 88545622

Intron Length:

24005

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGCGTAAT

5'SS Class:

major

3'SS Sequence:

TTCTCCCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

TTCTCCCTTACA

Flanking Amino Acid:

FLAEKEHKLEEYKRKLARVS

Intron Amino Acid Position:

263

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

33.3

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

86.1

0.81

0.7

80.2

25.3

Minor 5ss

32.6

-2

41.8

39.2

Minor BPS

60.9

0.34

76.46

40.3

Associated Gene:

Gene:

RPRD1A

Ensembl Gene ID:

ENSAPLG00000006646

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018666

88506966 - 88546772

39807

ENSAPLT00000006916

88508153 - 88546772

38620