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Intron Name: Anas_platyrhynchos_platyrhynchos_2_88551453_88551870_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

88551453 - 88551870

Intron Length:

418

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCTGTT

5'SS Class:

major

3'SS Sequence:

TTTTGTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

TCACCTTTAAGA

Flanking Amino Acid:

SKGNTPSSLPRIHASGQVTS

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

1.1

77.9

36.9

Major BPS

0.87

0.8

85.6

Major PPT

93.6

0.98

0.7

92.3

26.6

Minor 5ss

0.03

2.9

75.5

40.6

Minor BPS

59.1

0.28

1.6

65.27

41.3

Associated Gene:

Gene:

C18orf21

Ensembl Gene ID:

ENSAPLG00000006845

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025458

88551210 - 88556243

5034

ENSAPLT00000007095

88551210 - 88555875

4666