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Intron Name: Anas_platyrhynchos_platyrhynchos_2_8873127_8883311_R

Intron Information:

Intron Rank:

142061

Intron Class:

major

Intron Phase:

Intron Coordinates:

8873127 - 8883311

Intron Length:

10185

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTCTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCCTTTTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.9

77.9

36.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

86.5

0.82

0.6

85.2

22.1

Minor 5ss

38.9

-1.2

50.6

40.1

Minor BPS

57.4

0.31

1.6

70.13

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023766

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042498

8872997 - 8883693

10697