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Intron Name: Anas_platyrhynchos_platyrhynchos_2_88767404_88773632_R

Intron Information:

Intron Rank:

141376

Intron Class:

major

Intron Phase:

Intron Coordinates:

88767404 - 88773632

Intron Length:

6229

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGGTG

5'SS Class:

strong_major

3'SS Sequence:

TGAATATTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TGTGATTGAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.9

76.9

38.6

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

73.3

0.53

65.6

44.3

Minor 5ss

32.8

-2

3.7

45.9

49.3

Minor BPS

49.1

-0

1.7

61.76

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023416

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045615

88766718 - 88774653

7936