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Intron Name: Anas_platyrhynchos_platyrhynchos_2_88808952_88810065_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

88808952 - 88810065

Intron Length:

1114

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCAATCCAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TCTTTTTCAATC

Flanking Amino Acid:

IPRHYFSLGEIRNVETNQCL

Intron Amino Acid Position:

434

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.2

1.04

0.7

90.6

21.2

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

67.7

0.4

1.1

65.7

39.1

Minor 5ss

43.9

-0.7

3.2

64.8

46.5

Minor BPS

0.36

1.5

69.41

36.9

Associated Gene:

Gene:

GALNT1

Ensembl Gene ID:

ENSAPLG00000009730

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042120

88805150 - 88863878

58729

ENSAPLT00000010189

88805615 - 88885411

79797