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Intron Name: Anas_platyrhynchos_platyrhynchos_2_88810206_88817861_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

88810206 - 88817861

Intron Length:

7656

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTATCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TATTCTTTATCT

Flanking Amino Acid:

FKNFFYIISPGVTKVDYGDI

Intron Amino Acid Position:

387

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

82.1

24.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

81.6

0.71

0.8

74.4

35.4

Minor 5ss

27.3

-2.6

2.7

30.6

42.8

Minor BPS

75.2

0.87

1.5

89.09

35.5

Associated Gene:

Gene:

GALNT1

Ensembl Gene ID:

ENSAPLG00000009730

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042120

88805150 - 88863878

58729

ENSAPLT00000010189

88805615 - 88885411

79797