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Intron Name: Anas_platyrhynchos_platyrhynchos_2_88818043_88818979_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

88818043 - 88818979

Intron Length:

937

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGGTAAA

5'SS Class:

major

3'SS Sequence:

CTTTCACTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAC

U12 Branch Point Sequence:

TGTTCTTTCACT

Flanking Amino Acid:

GGENLEISFRIWQCGGTLEI

Intron Amino Acid Position:

327

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

1.1

74.1

38.3

Major BPS

77.7

0.69

30.2

Major PPT

84.8

0.78

0.7

81.7

Minor 5ss

33.2

-1.9

2.9

42.2

Minor BPS

72.8

0.8

1.7

88.47

36.7

Associated Gene:

Gene:

GALNT1

Ensembl Gene ID:

ENSAPLG00000009730

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042120

88805150 - 88863878

58729

ENSAPLT00000010189

88805615 - 88885411

79797