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Intron Name: Anas_platyrhynchos_platyrhynchos_2_88822535_88828328_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

88822535 - 88828328

Intron Length:

5794

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGACA

5'SS Class:

strong_major

3'SS Sequence:

TCGTTCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

GTTTCCACACAT

Flanking Amino Acid:

IVLVDDASERDFLKRPLESY

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

81.4

32.1

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

85.4

0.8

80.4

31.6

Minor 5ss

32.5

-2

3.1

40.7

45.3

Minor BPS

46.6

-0.1

2.1

71.82

44.2

Associated Gene:

Gene:

GALNT1

Ensembl Gene ID:

ENSAPLG00000009730

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042120

88805150 - 88863878

58729

ENSAPLT00000010189

88805615 - 88885411

79797