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Intron Name: Anas_platyrhynchos_platyrhynchos_2_88828496_88842331_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

88828496 - 88842331

Intron Length:

13836

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGGCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAA

U12 Branch Point Sequence:

CTTTACAAAATA

Flanking Amino Acid:

NRSLPDVRLEGCKTKVYADN

Intron Amino Acid Position:

105

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

78.8

35.5

Major BPS

73.5

0.59

81.3

29.9

Major PPT

83.5

0.75

0.9

76.5

37.7

Minor 5ss

34.9

-1.7

3.2

42.4

44.3

Minor BPS

47.7

-0.1

2.1

64.97

41.7

Associated Gene:

Gene:

GALNT1

Ensembl Gene ID:

ENSAPLG00000009730

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042120

88805150 - 88863878

58729

ENSAPLT00000010189

88805615 - 88885411

79797