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Intron Name: Anas_platyrhynchos_platyrhynchos_2_88842507_88847987_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

88842507 - 88847987

Intron Length:

5481

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TATTTGTTTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATAAA

U12 Branch Point Sequence:

AGTGTTTTATTT

Flanking Amino Acid:

KKERGLPAGDVPEPIQKPHE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

89.6

24.1

Major BPS

69.8

0.49

70.3

31.8

Major PPT

83.1

0.74

0.8

81.5

35.9

Minor 5ss

46.3

-0.4

2.8

64.1

41.5

Minor BPS

49.8

0.06

1.6

65.87

39.8

Associated Gene:

Gene:

GALNT1

Ensembl Gene ID:

ENSAPLG00000009730

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042120

88805150 - 88863878

58729

ENSAPLT00000010189

88805615 - 88885411

79797