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Intron Name: Anas_platyrhynchos_platyrhynchos_2_88848227_88863703_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

88848227 - 88863703

Intron Length:

15477

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAC

U12 Branch Point Sequence:

TGTGACTTACTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

1.1

76.2

32.9

Major BPS

71.3

0.53

1.2

63.1

44.5

Major PPT

95.4

1.02

0.6

88.7

28.3

Minor 5ss

29.3

-2.4

2.9

33.7

41.5

Minor BPS

52.8

0.17

1.9

73.41

43.7

Associated Gene:

Gene:

GALNT1

Ensembl Gene ID:

ENSAPLG00000009730

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042120

88805150 - 88863878

58729

ENSAPLT00000010189

88805615 - 88885411

79797