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Intron Name: Anas_platyrhynchos_platyrhynchos_2_89108816_89108961_F

Intron Information:

Intron Rank:

138401

Intron Class:

major

Intron Phase:

Intron Coordinates:

89108816 - 89108961

Intron Length:

146

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTAAGTGAT

5'SS Class:

major

3'SS Sequence:

TTTCTTATTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

ACTTTCTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

75.1

35.1

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

90.7

0.92

0.7

89.4

25.6

Minor 5ss

35.6

-1.6

3.3

45.6

43.6

Minor BPS

0.55

1.6

77.4

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024495

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025100

89106393 - 89109419

3027