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Intron Name: Anas_platyrhynchos_platyrhynchos_2_89137477_89137582_F

Intron Information:

Intron Rank:

138454

Intron Class:

major

Intron Phase:

Intron Coordinates:

89137477 - 89137582

Intron Length:

106

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTTCGTTCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTGAG

U12 Branch Point Sequence:

TTGTGGCTCATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.6

1.17

0.7

96.8

6.8

Major BPS

58.6

0.21

1.5

57.1

41.8

Major PPT

85.3

0.79

0.8

77.2

37.1

Minor 5ss

26.9

-2.6

4.1

42.9

44.7

Minor BPS

35.4

-1.2

2.7

47.05

46.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024539

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048413

89133980 - 89137798

3819