Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_89243840_89249252_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

89243840 - 89249252

Intron Length:

5413

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

CTTTGCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

TTTGGTTTAAAA

Flanking Amino Acid:

TALLNFVLSVVIFLTTLFYL

Intron Amino Acid Position:

673

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.5

Major BPS

73.1

0.58

79.6

29.1

Major PPT

86.2

0.81

0.8

80.4

31.5

Minor 5ss

37.6

-1.4

2.8

48.3

42.5

Minor BPS

56.3

0.19

71.99

40.5

Associated Gene:

Gene:

TMEM245

Ensembl Gene ID:

ENSAPLG00000009827

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040284

89217197 - 89296298

79102

ENSAPLT00000010238

89217496 - 89296298

78803

ENSAPLT00000044113

89217496 - 89296298

78803