Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_89280676_89284397_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

89280676 - 89284397

Intron Length:

3722

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGACTGAA

5'SS Class:

major

3'SS Sequence:

CCCTTACTTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTACAT

U12 Branch Point Sequence:

TTCCCCTTACTT

Flanking Amino Acid:

SSSERSSQPSEHQCSFLQQK

Intron Amino Acid Position:

298

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

73.7

32.5

Major BPS

73.9

0.59

30.2

Major PPT

0.56

0.8

69.4

30.1

Minor 5ss

32.1

-2

3.1

39.9

46.1

Minor BPS

66.7

0.6

1.6

81.08

41.1

Associated Gene:

Gene:

TMEM245

Ensembl Gene ID:

ENSAPLG00000009827

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044113

89217496 - 89296298

78803

ENSAPLT00000010238

89217496 - 89296298

78803