Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_89308907_89309365_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

89308907 - 89309365

Intron Length:

459

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTCAA

5'SS Class:

strong_major

3'SS Sequence:

TTACCTATTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACATTAT

U12 Branch Point Sequence:

CTGCCCTTACCT

Flanking Amino Acid:

YLFAWGPAIQGSITRHDIDS

Intron Amino Acid Position:

364

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

74.1

38.3

Major BPS

63.3

0.33

1.1

41.2

Major PPT

0.41

1.1

36.4

Minor 5ss

33.1

-1.9

2.8

32.9

41.9

Minor BPS

63.9

0.51

1.7

77.11

45.3

Associated Gene:

Gene:

FRRS1L

Ensembl Gene ID:

ENSAPLG00000009915

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010321

89308734 - 89315223

6490