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Intron Name: Anas_platyrhynchos_platyrhynchos_2_89313476_89314604_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
89313476 - 89314604

Intron Length:
1129

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGG|GTGCGCTGC

5'SS Class:
major

3'SS Sequence:
TCTCATTTTACAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTCTCAT

U12 Branch Point Sequence:
TGTATTTTATTT

Flanking Amino Acid:
FYDLRYLSEEGYPFPTAPPV

Intron Amino Acid Position:
207

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
64.6
0.35
1.1
51.2
42.9

Major BPS
94.9
1.12
0.6
93.9
14.7

Major PPT
85.3
0.79
0.8
79.4
32.3

Minor 5ss
37.2
-1.4
3.2
41.2
45.5

Minor BPS
55.9
0.26
1.6
72.59
38.9

Associated Gene:

Gene:
FRRS1L

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

89308734 - 89315223
6490