Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_89344789_89364103_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

89344789 - 89364103

Intron Length:

19315

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAATAAT

5'SS Class:

strong_major

3'SS Sequence:

ATCTTTTTTAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TTTTCTTTATCT

Flanking Amino Acid:

LMDFTEATPMIKTFPADTSN

Intron Amino Acid Position:

742

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

82.1

30.4

Major BPS

83.9

0.84

73.9

41.3

Major PPT

77.2

0.61

78.3

33.3

Minor 5ss

36.9

-1.5

2.9

47.6

42.5

Minor BPS

80.3

1.03

1.4

95.73

30.7

Associated Gene:

Gene:

EPB41L4B

Ensembl Gene ID:

ENSAPLG00000011064

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011539

89338999 - 89500924

161926

ENSAPLT00000026693

89338999 - 89500924

161926