Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_8951951_8952038_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8951951 - 8952038

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTTATG

5'SS Class:

major

3'SS Sequence:

CCTTCACTATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

ATTTCCTTCACT

Flanking Amino Acid:

LRMFDQQEIQVLISGAQVPI

Intron Amino Acid Position:

963

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

1.1

74.8

41.3

Major BPS

81.8

0.79

1.1

34.5

Major PPT

68.7

0.42

0.9

67.4

32.7

Minor 5ss

38.3

-1.3

51.3

45.2

Minor BPS

79.9

1.02

1.6

94.5

32.7

Associated Gene:

Gene:

UBE3C

Ensembl Gene ID:

ENSAPLG00000005692

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006021

8884858 - 8958906

74049