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Intron Name: Anas_platyrhynchos_platyrhynchos_2_89656937_89657772_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

89656937 - 89657772

Intron Length:

836

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAACAC

5'SS Class:

strong_major

3'SS Sequence:

ACTTGACCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

ATTTACTTGACC

Flanking Amino Acid:

EDGKFGFNLKGGVDQKMPLL

Intron Amino Acid Position:

560

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

68.4

36.7

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

66.5

0.37

0.9

56.2

39.7

Minor 5ss

31.6

-2.1

3.2

41.7

Minor BPS

0.74

1.4

81.51

32.1

Associated Gene:

Gene:

PTPN3

Ensembl Gene ID:

ENSAPLG00000009931

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043217

89624568 - 89783015

158448

ENSAPLT00000010393

89625568 - 89750612

125045