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Intron Name: Anas_platyrhynchos_platyrhynchos_2_89676515_89681378_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

89676515 - 89681378

Intron Length:

4864

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

TCTTACATTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

ATTTTCTTACAT

Flanking Amino Acid:

KFFIQQRQKHNESREHIVAF

Intron Amino Acid Position:

298

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

83.8

34.5

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

80.4

0.68

0.9

73.4

35.5

Minor 5ss

39.9

-1.1

2.9

56.1

41.4

Minor BPS

65.6

0.57

1.7

83.22

37.6

Associated Gene:

Gene:

PTPN3

Ensembl Gene ID:

ENSAPLG00000009931

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043217

89624568 - 89783015

158448

ENSAPLT00000010393

89625568 - 89750612

125045