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Intron Name: Anas_platyrhynchos_platyrhynchos_2_89706284_89716095_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

89706284 - 89716095

Intron Length:

9812

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TTCTTGTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

CACTTCTGAACT

Flanking Amino Acid:

DGSIQSFKVNKQDTGQILLD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

80.8

34.4

Major BPS

82.1

0.8

71.6

36.4

Major PPT

89.5

0.89

0.7

87.9

29.5

Minor 5ss

46.2

-0.4

2.8

62.9

41.8

Minor BPS

63.5

0.5

1.5

73.44

43.4

Associated Gene:

Gene:

PTPN3

Ensembl Gene ID:

ENSAPLG00000009931

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010393

89625568 - 89750612

125045

ENSAPLT00000043217

89624568 - 89783015

158448