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Intron Name: Anas_platyrhynchos_platyrhynchos_2_89821022_89823397_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

89821022 - 89823397

Intron Length:

2376

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAACT

5'SS Class:

strong_major

3'SS Sequence:

ACTGAAATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

CCTTCTTTAACT

Flanking Amino Acid:

EISIGALRFQVVGPCSRCQI

Intron Amino Acid Position:

781

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.83

0.9

79.9

32.9

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

66.1

0.36

44.2

Minor 5ss

42.2

-0.9

2.8

58.8

45.4

Minor BPS

81.4

1.06

1.1

87.23

Associated Gene:

Gene:

MOCOS

Ensembl Gene ID:

ENSAPLG00000009898

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041350

89813058 - 90038684

225627

ENSAPLT00000010313

89813058 - 90038684

225627

ENSAPLT00000010308

89818218 - 90038684

220467