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Intron Name: Anas_platyrhynchos_platyrhynchos_2_8983064_8985681_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8983064 - 8985681

Intron Length:

2618

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGTATT

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCCTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

TGCTCATTTACT

Flanking Amino Acid:

VAEAYEVLSDAKKRDIYDRY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

83.5

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

82.1

0.72

0.7

77.3

24.6

Minor 5ss

40.4

-1.1

3.2

56.3

42.5

Minor BPS

59.5

0.38

78.44

43.2

Associated Gene:

Gene:

DNAJB6

Ensembl Gene ID:

ENSAPLG00000005259

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031912

8981431 - 9021121

39691

ENSAPLT00000005470

8981431 - 9029266

47836