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Intron Name: Anas_platyrhynchos_platyrhynchos_2_89848455_89863124_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

89848455 - 89863124

Intron Length:

14670

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTTT

5'SS Class:

strong_major

3'SS Sequence:

GTGAATCGGGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

CTTCTCTTATGT

Flanking Amino Acid:

ENGEVIGFSQVEKMASLHNI

Intron Amino Acid Position:

392

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

89.6

24.2

Major BPS

79.1

0.72

69.3

38.4

Major PPT

46.4

-0.2

1.2

41.5

Minor 5ss

57.8

0.27

2.3

75.5

40.6

Minor BPS

0.14

1.9

72.48

44.6

Associated Gene:

Gene:

MOCOS

Ensembl Gene ID:

ENSAPLG00000009898

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017617

89813090 - 90038684

225595

ENSAPLT00000010313

89813058 - 90038684

225627

ENSAPLT00000010308

89818218 - 90038684

220467