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Intron Name: Anas_platyrhynchos_platyrhynchos_2_8985742_8986086_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8985742 - 8986086

Intron Length:

345

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

GGGTAATTGATT

Flanking Amino Acid:

GKEGLINGGGGGSHVDNPFE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.9

76.7

34.9

Major BPS

84.4

0.85

34.5

Major PPT

1.1

0.4

13.8

Minor 5ss

45.7

-0.5

2.5

58.5

Minor BPS

47.7

-0.1

1.8

62.83

41.1

Associated Gene:

Gene:

DNAJB6

Ensembl Gene ID:

ENSAPLG00000005259

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031912

8981431 - 9021121

39691

ENSAPLT00000005470

8981431 - 9029266

47836