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Intron Name: Anas_platyrhynchos_platyrhynchos_2_8986198_8996388_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8986198 - 8996388

Intron Length:

10191

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TCGTGTTTTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

ACCTATTTAATT

Flanking Amino Acid:

GRDPFSFDFFEDPFEDFFGN

Intron Amino Acid Position:

116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

88.8

Major BPS

90.7

1.01

0.7

19.9

Major PPT

77.7

0.62

0.9

72.9

37.4

Minor 5ss

37.5

-1.4

2.8

48.3

41.8

Minor BPS

61.1

0.43

1.5

70.58

41.2

Associated Gene:

Gene:

DNAJB6

Ensembl Gene ID:

ENSAPLG00000005259

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031912

8981431 - 9021121

39691

ENSAPLT00000005470

8981431 - 9029266

47836