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Intron Name: Anas_platyrhynchos_platyrhynchos_2_8996521_8997376_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8996521 - 8997376

Intron Length:

856

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATATC

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCCCAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCAAAT

U12 Branch Point Sequence:

TCTTCCCCAATA

Flanking Amino Acid:

FGSAFPSFDTGFTSFGSLGH

Intron Amino Acid Position:

160

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.8

87.7

26.2

Major BPS

59.5

0.24

1.2

67.3

37.8

Major PPT

71.1

0.48

0.8

28.1

Minor 5ss

39.6

-1.2

2.9

43.3

Minor BPS

0.25

1.9

72.38

39.9

Associated Gene:

Gene:

DNAJB6

Ensembl Gene ID:

ENSAPLG00000005259

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031912

8981431 - 9021121

39691

ENSAPLT00000005470

8981431 - 9029266

47836