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Intron Name: Anas_platyrhynchos_platyrhynchos_2_9021015_9029183_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9021015 - 9029183

Intron Length:

8169

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGCAAA

5'SS Class:

major

3'SS Sequence:

CATGTTTCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAC

U12 Branch Point Sequence:

ATACTGTGAATA

Flanking Amino Acid:

SSLETPFYLSGYKEGSKRRK

Intron Amino Acid Position:

300

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

0.9

71.9

34.7

Major BPS

72.3

0.55

1.2

77.4

37.4

Major PPT

75.9

0.58

0.9

73.2

36.9

Minor 5ss

39.3

-1.2

2.8

47.6

48.1

Minor BPS

45.3

-0.3

56.69

36.3

Associated Gene:

Gene:

DNAJB6

Ensembl Gene ID:

ENSAPLG00000005259

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005470

8981431 - 9029266

47836