Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_90714995_90715775_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

90714995 - 90715775

Intron Length:

781

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTAAT

5'SS Class:

major

3'SS Sequence:

TCTTGTGTCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

CATATTTAAACT

Flanking Amino Acid:

KIGGVSERMPVQVIRAFGIL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

81.1

32.8

Major BPS

81.6

0.78

0.8

24.9

Major PPT

78.5

0.64

0.9

76.2

37.8

Minor 5ss

39.6

-1.2

2.9

41.2

Minor BPS

52.9

0.17

1.7

68.81

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007736

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036020

90704284 - 90719023

14740

ENSAPLT00000034711

90704284 - 90721099

16816

ENSAPLT00000008043

90704284 - 90719932

15649